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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910724.1_cds_XP_016460741.1_54133
CDS Infomation

[gene=LOC107784172] [db_xref=GeneID:107784172] [protein=glutamate--cysteine ligase, chloroplastic-like] [protein_id=XP_016460741.1] [location=join(48806..49131,49820..49970,50183..50290,50669..50761,51753..51836,52038..52106,52182..52252,52336..52404,53447..53540,53611..53700,53790..53870,54375..54467,54679..54759,54842..54911,55070..55158)] [gbkey=CDS]
Sequence

ATGGCCTTGATGTCTCAGGCAGGTTCTTCTCATTGCATTTACTCTGAAAAGATGAAATGT
ATAAGTGGACACAACAACATCACGAACAATATGGAGATGCTCAAAATGAAGGAGATATGC
TTTGGCAATATTTCTTCACGGAATTCCTCAAAACGAATGCAGGGGATTTATTTGGATCGC
GTTGTAATGGAACGCAGACGAGGACGCCTGGCAATTGTTGCTGCAAGTCCTCCAACAGAG
GATGCCGTCGTTGCAGCAGAACCATTAACAAAAGAAGACCTTGTAGCTTATCTTGCTTCT
GGATGCAAATCCAAAGAAAAATGGAGGATAGGCACTGAACATGAAAAGTTTGGTTTCGAG
TTTGGAACTCTGCGACCCATGAAGTATGAACAAATAGCTGAATTACTAAATGGTATTGCC
GAGCGATTTGATTGGGAAAAAGTAATGGAGGGTGACAAGATTATTGGCTTGAAACAGGGA
AAGCAAAGCATATCACTGGAACCTGGTGGTCAGTTTGAGCTTAGTGGTGCACCACTTGAA
ACACTGCATCAAACTTGTGCAGAGGTTAATTCACATCTTTACCAGGTTAAAGCTGTTGCA
GAGGAAATGGGAATTGGATTCTTAGGAACTGGATTCCAGCCAAAGTGGGGGCTGAAAGAT
ATACCAGTAATGCCGAAGGGGAGATACGAGATTATGAGAAATTACATGCCCAAAGTTGGC
TCACTTGGACTAGATATGATGTTTAGAACATGCACTGTTCAGGTAAATCTGGACTTCAGT
TCTGAAGCTGACATGATCAGAAAGTTTCGTGCTGGTCTTGCCTTGCAGCCTATTGCTACA
GCTCTCTTTGCTAATTCACCTTTCACTGAAGGAAAACCTAATGGTTATCTCAGCATGAGA
AGCCACATTTGGACCGATACAGATAATAACCGTGCCGGGATGCTTCCCTTCGTCTTTGAT
GACTCTTTTGGGTTTGAGCAGTATGTGGATTATGCACTTGACGTCCCTATGTATTTTGTC
TATCGGAAGAAAAAGTATATTGATTGTGCTGGAATGTCTTTCCGGGACTTCATGAATGGA
AAACTTCCGCCTATTCCCGGCGACTACCCTACTCTTAATGATTGGGAGAATCACCTCACA
ACAATATTTCCCGAGGTGAGACTCAAAAGATATCTGGAAATGCGAGGTGCCGATGGAGGA
CCTTGGAGAAGGTTGTGTGCATTGCCTGCATTCTGGGTGGGTATACTCTACGATGAGGTG
TCTTTGCAAACCGTTTTGGACATGACGTCTGATTGGACTGCAGAAGAAAGAGAGATGTTG
AGGAATAAGGTGCCAACAAGCGGTTTGAAGACACCATTTCGAGATGGATTGCTTAAGCAT
GTTGCTCAAGATGTTGTCAAGTTGGCGAAGGAAGGCTTGGAGAGAAGAGGCTATAAGGAA
ACAGGATTTTTGAATGAAGTAACCGAGGTAGTCAAAACAGGTGTAACACCAGCTGAGAAG
CTCCTGGAATTGTACCATGGGAAGTGGGGACGAAGCGTGGATCCTGTCTTTGAGGAGCTT
CTCTATTGA

Peptide Sequence

PEP ID

XP_016460741.1
PEP Infomation

PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Nicotiana tabacum]
Sequence

MALMSQAGSSHCIYSEKMKCISGHNNITNNMEMLKMKEICFGNISSRNSSKRMQGIYLDR
VVMERRRGRLAIVAASPPTEDAVVAAEPLTKEDLVAYLASGCKSKEKWRIGTEHEKFGFE
FGTLRPMKYEQIAELLNGIAERFDWEKVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLE
TLHQTCAEVNSHLYQVKAVAEEMGIGFLGTGFQPKWGLKDIPVMPKGRYEIMRNYMPKVG
SLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMR
SHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFMNG
KLPPIPGDYPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGILYDEV
SLQTVLDMTSDWTAEEREMLRNKVPTSGLKTPFRDGLLKHVAQDVVKLAKEGLERRGYKE
TGFLNEVTEVVKTGVTPAEKLLELYHGKWGRSVDPVFEELLY

Transcript Sequence

Gene sequence data has not been registered.